Publications

Google Scholar Profile

Journal Publications

  • Sumaiya Nazeen, Yun William Yu, and Bonnie Berger. "Carnelian uncovers hidden functional patterns across diverse study populations from whole metagenome sequencing reads". Genome Biology 2020, 21(1): 47
  • Sumaiya Nazeen†, Nathan P Palmer†, Bonnie Berger*, and Isaac S Kohane*, "Integrative analysis of genetic datasets reveals a shared innate immune component in autism spectrum disorder and its co-morbidities", Genome Biology 2016, 17(1): 228
  • Sumaiya Nazeen, M. Sohel Rahman, and Rezwana Reaz, "Indeterminate String Inference Algorithms", Journal of Discrete Algorithms 2012, 10: 23-34
  • Tanaeem M. Moosa,  Sumaiya Nazeen, M. Sohel Rahman, and Rezwana Reaz, "Inferring Strings from Cover Arrays", Discrete Mathematics, Algorithms and Applications 2013, 5(02): 1360005

Conference Publications

  • Sumaiya Nazeen and Bonnie Berger, "Carnelian: alignment-free functional binning and abundance estimation of metagenomic reads". ECCB (Applications Track), Greece (2018)
  • Tanaeem M. Moosa, Sumaiya Nazeen, M. Sohel Rahman, and Rezwana Reaz, "Linear Time Inference of Strings from Cover Arrays using a Binary Alphabet". Md. S. Rahman and S.-i. Nakano (eds.) WALCOM 2012. LNCS, vol. 7157, pp. 160-172. Springer, Heidelberg (2012)